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A thermal FE Model must contain a set of Boundary Conditions. The thermal analysis-related boundary conditions (in red box) can be accessed in the Simulation tab of the ribbon.
The relevant boundary conditions to a thermal analysis are defined in a Boundary Condition List block, as shown below.
Example: Defining a Boundary Condition List with three BCs (Temperature Restraint, Convection, and Radiation)
The various thermal boundary conditions available in nTop are explained below.
Applies a distributed heat flux normal to selected boundary face entities (either CAD or FE boundary) with the input of Magnitude (can be field-based). You can reverse the heat flux direction normal with a negative sign when defining its magnitude. 
Applies a convection load to selected boundary face entities (either CAD Face or FE Boundary) with inputs of Ambient temperature and Convection coefficient (can be field-based). 
Applies a radiation load to selected boundary face entities (either CAD Face or FE Boundary) with inputs: Ambient temperature and Emissivity (can be field-based).
Applies a total heat generation power to a selected Region. The quantity of heat generation is distributed across the nodes based on volume fraction. The Magnitude of heat generation input is mm2s-3kg (W).
Similar to the Heat Generation boundary condition, but additionally allows the magnitude of heat generation to be field-based. The magnitude of volumetric heat generation input is  mm-1s-3kg (W/m3).
Applies a  temperature boundary restraint (can be field-based) to selected Boundary entities (either CAD Face or FE Boundary).
The following boundary conditions are specific to a Thermal Stress Analysis:
Defines a baseline temperature (can be field-based) to be used in a thermal stress analysis in order to calculate the stress due to expansion/contraction based on the difference between the Initial Temperature and the Applied Temperature Load.
Defines an Applied Temperature (can be field-based) to be used in a thermal stress analysis to calculate the stress due to expansion/contraction based on the difference between the Initial Temperature and the Applied Temperature Load.